Index

_

__init__() (OCD_modeling.analysis.pw_RWW_2D method), [1] (OCD_modeling.analysis.symRWW_2D method), [1] (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.models.ReducedWongWangOU method), [1] (OCD_modeling.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangOU method), [1]

C

cohen_d() (in module OCD_modeling), [1] (in module OCD_modeling.utils), [1] compute_bold() (in module OCD_modeling.models), [1] compute_distance_restore() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1], [2] compute_distance_restore_sims() (in module OCD_modeling.mcmc), [1], [2] compute_distances() (in module OCD_modeling.mcmc), [1], [2] compute_efficacy() (in module OCD_modeling.mcmc), [1], [2] compute_equilibrium_point_curve() (in module OCD_modeling), [1] (in module OCD_modeling.analysis), [1], [2] compute_errors() (in module OCD_modeling.mcmc), [1], [2] compute_kdes() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1], [2]

compute_scaled_feature_score() (in module OCD_modeling.mcmc), [1], [2] compute_stats() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1], [2] compute_trajectories() (in module OCD_modeling), [1] (in module OCD_modeling.analysis), [1], [2] create_df_null() (in module OCD_modeling.mcmc), [1] create_model() (in module OCD_modeling), [1] (in module OCD_modeling.analysis), [1], [2] create_params() (in module OCD_modeling.mcmc), [1] create_sim_df() (in module OCD_modeling.models), [1] cross_validation() (in module OCD_modeling.mcmc), [1]

D

dS() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1]

E

emd() (in module OCD_modeling), [1] (in module OCD_modeling.utils), [1]

evaluate_prediction() (in module OCD_modeling.mcmc), [1]

F

find_roots() (in module OCD_modeling.analysis), [1]

fix_df_base() (in module OCD_modeling.mcmc), [1]

G

get_default_params() (in module OCD_modeling.mcmc), [1] get_df_base() (in module OCD_modeling.mcmc), [1] get_fixed_point_stability() (in module OCD_modeling.analysis), [1] get_fixed_points() (in module OCD_modeling.analysis), [1], [2]

get_history_parser() (in module OCD_modeling.mcmc), [1] get_parser() (in module OCD_modeling.analysis), [1] get_prior() (in module OCD_modeling.mcmc), [1] get_working_dir() (in module OCD_modeling), [1] (in module OCD_modeling.utils), [1]

H

H() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1]

I

import_results() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1] integrate() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.models.ReducedWongWangOU method), [1] (OCD_modeling.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangOU method), [1]

L

lambdify_model() (in module OCD_modeling.analysis), [1] launch_pool_simulations() (in module OCD_modeling.hpc) launch_sims_parallel() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1], [2], [3] launch_stability_analysis() (in module OCD_modeling.analysis), [1], [2]

load_C_param() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1] load_df_data() (in module OCD_modeling.mcmc), [1] load_empirical_data() (in module OCD_modeling.mcmc), [1], [2] load_simulations() (in module OCD_modeling.mcmc), [1], [2]

M

module OCD_modeling, [1] OCD_modeling.analysis, [1] OCD_modeling.mcmc, [1] OCD_modeling.models, [1] OCD_modeling.utils, [1]

monitor() (in module OCD_modeling.utils), [1] multivariate_analysis() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1]

O

OCD_modeling module, [1] OCD_modeling.analysis module, [1] OCD_modeling.mcmc module, [1]

OCD_modeling.models module, [1] OCD_modeling.utils module, [1]

P

paired_euclidian() (in module OCD_modeling.utils), [1] perform_stability_analysis() (in module OCD_modeling.analysis), [1] plot_3d_bifurcations() (in module OCD_modeling.analysis), [1] plot_auxiliary_variables() (in module OCD_modeling.models), [1] plot_bifurcation_grid() (in module OCD_modeling.analysis), [1] plot_bifurcation_row() (in module OCD_modeling.analysis), [1], [2] plot_bold() (in module OCD_modeling.models), [1] plot_control_params() (in module OCD_modeling.models), [1] plot_correlations() (in module OCD_modeling.models), [1] plot_cv_regression() (in module OCD_modeling.mcmc), [1] plot_distance_restore() (in module OCD_modeling.mcmc), [1], [2] plot_efficacy_by_number_of_target() (in module OCD_modeling.mcmc), [1], [2] plot_epsilons() (in module OCD_modeling.mcmc), [1], [2] plot_errors() (in module OCD_modeling.mcmc), [1], [2] plot_fc_sim_vs_data() (in module OCD_modeling.mcmc), [1], [2] plot_five_top_params_distance_correlations() (in module OCD_modeling.mcmc), [1], [2] plot_improvement_pre_post_params_paper() (in module OCD_modeling.mcmc), [1], [2] plot_improvement_windrose() (in module OCD_modeling.mcmc), [1], [2] plot_kdes() (in module OCD_modeling.mcmc), [1], [2], [3]

plot_monitoring() (in module OCD_modeling.utils), [1] plot_multivariate_results() (in module OCD_modeling.mcmc), [1] plot_null_distrib() (in module OCD_modeling.mcmc), [1] plot_param_behav() (in module OCD_modeling.mcmc), [1] plot_param_distrib() (in module OCD_modeling.mcmc), [1] plot_parameters_contribution() (in module OCD_modeling.mcmc), [1], [2] plot_phasespace() (in module OCD_modeling.analysis), [1], [2] plot_phasespace_grid() (in module OCD_modeling.analysis), [1], [2] plot_pre_post_dist_ybocs() (in module OCD_modeling.mcmc), [1], [2] plot_single_contribution_windrose() (in module OCD_modeling.mcmc), [1] plot_timeseries() (in module OCD_modeling.models), [1] plot_timeseries_phasespace_bif() (in module OCD_modeling.analysis), [1], [2] plot_weights() (in module OCD_modeling.mcmc), [1], [2] prepare_auxiliary_variables() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1] prepare_control_params() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1] print_ANOVA() (in module OCD_modeling.mcmc), [1] pw_RWW_2D (class in OCD_modeling.analysis), [1]

R

record_auxiliary_variables() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.models.ReducedWongWangOU method), [1] (OCD_modeling.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangOU method), [1] ReducedWongWangND (class in OCD_modeling), [1] (class in OCD_modeling.models), [1] ReducedWongWangOU (class in OCD_modeling), [1] (class in OCD_modeling.models), [1]

rmse() (in module OCD_modeling), [1] (in module OCD_modeling.utils), [1] run() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1] run_abc() (in module OCD_modeling.mcmc), [1] run_sim() (in module OCD_modeling.hpc) run_stability_analysis() (in module OCD_modeling.analysis), [1], [2]

S

score_improvement() (in module OCD_modeling.mcmc), [1], [2] score_model() (in module OCD_modeling.models), [1] score_population_models() (in module OCD_modeling.models), [1] set_control_params() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1] simulate_population_rww() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1], [2]

simulate_rww() (in module OCD_modeling), [1] (in module OCD_modeling.mcmc), [1] stability_analysis() (in module OCD_modeling), [1] (in module OCD_modeling.analysis), [1], [2] SymbolicModel (class in OCD_modeling.analysis), [1] symRWW_2D (class in OCD_modeling.analysis), [1]

U

unpack_params() (in module OCD_modeling.mcmc), [1]

update_control_params() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1]

V

v() (OCD_modeling.models.ReducedWongWangND method), [1] (OCD_modeling.ReducedWongWangND method), [1]

W

write_outputs_to_db() (in module OCD_modeling.mcmc), [1]